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AT5G47690.1

Arabidopsis thaliana [ath]

binding protein

56 PTM sites : 7 PTM types

PLAZA: AT5G47690
Gene Family: HOM05D000555
Other Names: PDS5
Uniprot
B6EUB3

Link out to other resources with this protein ID : TAIR   |   PeptideAtlas   |   ARAPORT   |   PhosPhAt

For each protein all PTMs are highlighted by default in the respective protein sequence (right-hand side). One can adjust a selection of PTMs in the PTM table on the left-hand side. In addition, functional protein domains and sites can be underlined if desired.

In the PTM table per PTM the PTM position and type is indicated, as well as the plain peptide sequence that was identified by mass spectrometry. The respective proteomics study is indicated by a number, providing a link to consult the experimental details. Additional PTM meta-data includes various confidence measures such as peptide score provided by search algorithms, posterior error probability (PEP), precursor mass deviation (in ppm) and modification site probability. The available confidence meta-data can be consulted in the extended PTM table by clicking SHOW CONFIDENCE. However, in the default PTM table, a color-coding of confidence is provided with green indicating high confidence, olive medium confidence, grey low confidence, and no color an unassigned confidence. More details regarding this confidence assignment can be consulted in the tutorial or the Plant PTM Viewer manuscript.

Besides confidence measures, log2 fold changes between two conditions with significance values (P- or Q-values) are shown if provided in the respective publication. Log2 fold changes are colored in heatmap-like gradient (green = induced, red = repressed) and significant values are highlighted in green. To determine significance, we employed the threshold used in the respective publication. For more details on the quantitative measurements we refer to the experimental details and respective publication, as methodologies can differ.

On the bottom of the page one can send the whole protein or a part of the protein (i.e. a functional domain) to PTM Blast. This will display aligned protein sequences that potentially report aligned PTMs.

PTMs

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Results
PTM Type
Mod AA
Pos
Peptide
Exp ID
Conf
so C 79 LLVASCVSEITR108
sno C 219 VIEHCAPK169
sno C 333 DCLLSDPLR169
sno C 351 AEASQIISALCDR169
ox C 438 CLYDKDFR138a
ph S 530 ILFGFRVMSR63
ph T 566 ILTNLLDPNTSITQASR86a
ph T 569 ILTNLLDPNTSITQASR86a
86b
86c
ph S 572 ILTNLLDPNTSITQASR86a
86b
86c
sno C 698 ICVEGNR169
ac K 779 LKSETVDDK101
ox C 797 LSWDDKSEICQLK138b
sno C 797 SEICQLK169
ph T 1130 LESHADASVIPQTSENEVMIDGESDGNEIPLGK83
ph S 1131 LESHADASVIPQTSENEVMIDGESDGNEIPLGK83
100
114
ph S 1141 LESHADASVIPQTSENEVMIDGESDGNEIPLGK18a
83
85
94
100
109
114
nt S 1204 SSNGHKHSPSERAE167b
ph S 1211 FESSNGHKHSPSER88
114
ph S 1235 NVGDATSVVSVPK114
ph S 1238 NVGDATSVVSVPKR114
ac K 1241 NVGDATSVVSVPKR101
ph S 1245 SSSGHSPYK88
ph S 1247 SSSGHSPYKFSNSGPK114
SSSGHSPYK88
ph S 1250 SSSGHSPYKFSNSGPK114
SSSGHSPYK88
ph S 1266 VQLKASEDELHLESDMDK83
100
114
ASEDELHLESDMDK88
ph S 1274 ASEDELHLESDMDKNVSLDSHDENSDQEK85
VQLKASEDELHLESDMDK83
100
114
ASEDELHLESDMDK44
59
60
83
84b
85
88
100
106
109
ph S 1281 ASEDELHLESDMDKNVSLDSHDENSDQEK85
NVSLDSHDENSDQEK84b
85
88
100
106
114
ph S 1284 ASEDELHLESDMDKNVSLDSHDENSDQEK85
NVSLDSHDENSDQEK59
83
84b
88
100
106
109
114
ph S 1289 ASEDELHLESDMDKNVSLDSHDENSDQEK85
NVSLDSHDENSDQEK59
84b
85
88
100
106
109
114
ph S 1297 MLESISPRK83
MLESISPR88
106
114
ph S 1299 MLESISPR18a
60
83
85
88
100
106
114
ph S 1316 ITESDWALTDVER114
ph T 1321 ITESDWALTDVER114
ox C 1370 LVNDELIGCR138a
138b
sno C 1370 LVNDELIGCR169
ac K 1388 FYEGTVKSYDSTK101
ph T 1421 EQWELIDTGGK114
ph T 1425 EQWELIDTGGKTAK114
ph T 1462 NPDGVQRDEDPVTTTPK83
100
109
114
DEDPVTTTPK88
ub K 1464 DEDPVTTTPKGKR40
ph S 1484 SLSLEHEKVESR114
ph S 1486 SLSLEHEKVESR88
SLSLEHEK88
100
109
114
ph S 1494 SLSLEHEKVESR88
114
ph S 1510 TEYSGEAGEEKSESEGK85
114
TEYSGEAGEEK38
88
100
ph S 1518 TEYSGEAGEEKSESEGK88
114
ph S 1520 TEYSGEAGEEKSESEGK114
ph S 1524 SLKEGEDDEEVVNKEEDLQEAK38
60
100
114
SLKEGEDDEEVVNK83
100
ph T 1546 EGEDDEEVVNKEEDLQEAKTESSGDAEGK100
EEDLQEAKTESSGDAEGK38
ph S 1548 EGEDDEEVVNKEEDLQEAKTESSGDAEGK94
100
TESSGDAEGK85
88
ph S 1549 EGEDDEEVVNKEEDLQEAKTESSGDAEGK94
100
ph S 1562 EAEHDDSDTEGKQENNEMEREAEENAETSDNETLGAWK94
EAEHDDSDTEGKQENNEMER38
59
60
84b
85
88
100
EAEHDDSDTEGK88
ph T 1564 EAEHDDSDTEGKQENNEMER100
ph T 1583 EAEHDDSDTEGKQENNEMEREAEENAETSDNETLGAWK100
EAEENAETSDNETLGAWK83
106
114
ph S 1584 EAEHDDSDTEGKQENNEMEREAEENAETSDNETLGAWK94
100
QENNEMEREAEENAETSDNETLGAWK100
EAEENAETSDNETLGAWKSK60
EAEENAETSDNETLGAWK44
59
66
83
84a
84b
85
88
100
106
109
111a
111b
111c
111d
114
136
ph T 1588 EAEENAETSDNETLGAWK38
59
66
83
114
ac K 1598 VGKSISR101

Sequence

Length: 1605

MAQKPEEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEILNHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVLILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLEESEDVQEHLLLILLSKLGRNRSDVRDAARRLAMKVIEHCAPKVESDIKQFLISSMSGDSRFSSSQIDYHEVIYDLYRCAPQALSGVAPYLTGELLADKLETRLKVVGLVGELFSLPGRVISEEFDSIFLEFLKRLTDRVVEVRMAILDHIKDCLLSDPLRAEASQIISALCDRLLDYDENIRKQVVAVICDVSVSALTSIPVDTMKLVAERLRDKAILVKTYTMERLTELFRVYCLRCADGKVDTGDFNWIPGKILRCLYDKDFRSDTIEYILCSSLFPSDFSVRDKVKHWIQIFSGFDKVETKAFEKILEQRQRIQQEMQRYLSIKQTQQTADAPEIQKKILFGFRVMSRAFSDPPKTEQNFLILDQLKDANIWKILTNLLDPNTSITQASRIRDDMLKILSEKHSLYDFLSTLSIKCSYLLFSKEYVKEILAEVSVRKSSKNTLGIQPCMDFLGLLACFCPSLFDGAEEELISFLKDDDEMMKEGTLKILAKAGGTIRENLIVLASSVDLLLERICVEGNRKQAKYAVHALASITKDDGLKSLSVLYKRLVDMLEDKRYQPAVLQCLGCIAQIAMPVYETRESEVVEFIRSKILKLKSETVDDKKLSWDDKSEICQLKIYGIKTLVKSYLPFKDAQLRAGVDDLLGILKNILSFGEVSEDLESSSVDKAHLRLAAAKAVLRLSRHWDDKIPIEIFHLTLKTPEIPFPTAKKIFLGKVHQYVKDRVLEMKYACSFLFDITGSNVLESEEDKHNLADIIQHSYQTKVRKISAQTDANSVTLYPHHILPYLVHALAHHSCPDVEKCKDVKEYEMIYRQLYLIISMLLHKEEDGKTEDIDKEREYVPTIILIFHSIKQSEDVTDATKSKNSHAICELGLSIINHLTQKEPDLQGEITPVSLPPTLYKPSEKVEGDKSQVGEEKLWLADETVLLHFRALKLESHADASVIPQTSENEVMIDGESDGNEIPLGKIVERLRAQGTKTRKGKKNKSVPAEDENGKNDVDVLKMVREINLDHLQMLDKFESSNGHKHSPSERAEICQRDQKGNKRNVGDATSVVSVPKRRRSSSGHSPYKFSNSGPKVQLKASEDELHLESDMDKNVSLDSHDENSDQEKMLESISPRKRKKSLSSKLKITESDWALTDVERSRSAGGGDSKLKSASGSMKKRKNVSGLAKCSTKENKLVNDELIGCRIEVWWPMDKRFYEGTVKSYDSTKQRHVILYEDGDVEVLNLKKEQWELIDTGGKTAKKSRTSKGNSKKKRSSGSKPKNPDGVQRDEDPVTTTPKGKRTPKKNLKQLHPKDTPKSLSLEHEKVESRNKKRRSSALPKTEYSGEAGEEKSESEGKSLKEGEDDEEVVNKEEDLQEAKTESSGDAEGKEAEHDDSDTEGKQENNEMEREAEENAETSDNETLGAWKSKVGKSISRTAI

ID PTM Type Color
so S-sulfenylation X
sno S-nitrosylation X
ox Reversible Cysteine Oxidation X
ph Phosphorylation X
ac Acetylation X
nt N-terminus Proteolysis X
ub Ubiquitination X
Multiple types X
No domains or active sites found for this protein.

BLAST


Perform a BLAST search for this sequence, or a part of this sequence (minimum 50 characters)
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